BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005A12LP1|AL425321
(1013 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1592 1860 0.0
>3x_Contig1592
Length = 12307
Score = 1860 bits (930), Expect = 0.0
Identities = 979/1000 (97%), Gaps = 3/1000 (0%)
Strand = Plus / Plus
Query: 1 atgtactcatcttttttgtgcgaatatgatatgatagggtagaatagaatatgtactcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4571 atgtactcatcttttttgtgcgaatatgatatgatagggtagaatagaatatgtactcaa 4630
Query: 61 ttcaacaacacttagtcgaactcgattagtttactctctcgctttctttctatgagcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4631 ttcaacaacacttagtcgaactcgattagtttactctctcgctttctttctatgagcaga 4690
Query: 121 gatgtgatgacaaagggtggcaaaaacacacagagaaggatggaaaaaaaacagaactcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4691 gatgtgatgacaaagggtggcaaaaacacacagagaaggatggaaaaaaaacagaactcg 4750
Query: 181 tgcttcgctaatcaaagagattatgtagacacactctagtttctaatgtgattctgaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4751 tgcttcgctaatcaaagagattatgtagacacactctagtttctaatgtgattctgaacc 4810
Query: 241 tgaattgaccttagttgacaaagatcctcaaccaagtatgggatttgagcctgaagactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4811 tgaattgaccttagttgacaaagatcctcaaccaagtatgggatttgagcctgaagactg 4870
Query: 301 tgtagcttgaagtttgtttgatttaracctttgttcccctgtaaaataaagcaagtttaa 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4871 tgtagcttgaagtttgtttgatttaaacctttgttcccctgtaaaataaagcaagtttaa 4930
Query: 361 actttctaaatgaraatratataavakatctcttattctaaaaaaaagaacccaaacgta 420
||||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||
Sbjct: 4931 actttctaaatgaaaataatataaaatatctcttattctaaaaaaaagaacccaaacgta 4990
Query: 421 ttaataatataatakrcgttcaavagaagcgggattagaaaggagataacagagaaaaaa 480
|||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4991 ttaataatataatacacgttcaaaagaagcgggattagaaaggagataacagagaaaaaa 5050
Query: 481 aagtaacacgaagcgaccctttaagagagagaaggaagaagcatcagagaggcggaggac 540
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 5051 aagtaacacgaagcgaccctttaagagagaaaaggaagaagcatcaaagaggcggaggac 5110
Query: 541 tactattttmaatgaggtgaaaagggttaavttgtagagagtagcgcgtasaaactagtt 600
||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 5111 tactattttaaatgaggtgaaaagggttaaattgtagagagtagcgcgtagcaactagtt 5170
Query: 601 tatgaatcattttaactggcaagacaaggttaatgtcgtcgtttttgttttttttagcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5171 tatgaatcattttaactggcaagacaaggttaatgtcgtcgtttttgttatttttagcaa 5230
Query: 661 ataccgatgagtttgtacggctaaacttttcagaaaggcatgtagtttgcaatgatcggc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5231 ataccgatgagtttgtacggctaaacttttcagaaaggcatgtagtttgcaatgatcggc 5290
Query: 721 cggcacgagtaggatggttagcaattaccgagtagagtgaggagggagagaatgccaagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5291 cggcacgagtaggatggttagcaattaccgagtagagtgaggagggagagaatgccaagg 5350
Query: 781 gcttgataatatgaagcgcaaggggtggctggcgaggggt-aactgaggggtgc-mccga 838
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 5351 gcttgataatatgaagcgcaaggggtggctggcgaggggtaaactgaggggtgcacccga 5410
Query: 839 acttgc-ttyccgtttcctcctatggttgcgatactactttgtgtatgtaataagcaggt 897
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5411 acttgctttcccgtttcctcctatggttgcgatactactttgtgtatgtaataagcaggt 5470
Query: 898 caccgggtaatattgcactacagatactaaagtatagcaataacggagaaaatgtgtgag 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5471 caccgggtaatattgcactacagatactaaagtatagcaataacggagaaaatgtgtgag 5530
Query: 958 tttatccgaatactgaaatccggtcgggtaaatwagggga 997
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5531 tttatccgaatactgaaatccggtcgggtaaattagggga 5570
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7211
Number of Sequences: 1807
Number of extensions: 7211
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 1013
length of database: 10,358,551
effective HSP length: 16
effective length of query: 997
effective length of database: 10,329,639
effective search space: 10298650083
effective search space used: 10298650083
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)